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Merge pull request #2385 from native-api/condas

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Add Anaconda 2019.10, 2021.04, 2022.05; support Anaconda in add_miniconda.py
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native-api 2022-06-08 22:40:50 +03:00 committed by GitHub
commit c3404568e8
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5 changed files with 215 additions and 72 deletions
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57
.github/workflows/modified_scripts_build.yml vendored
View file

@ -33,22 +33,31 @@ jobs:
- uses: actions/checkout@v2
- run: |
brew install openssl openssl@1.1 readline sqlite3 xz zlib
# https://github.com/pyenv/pyenv#installation
- run: pwd
- env:
PYENV_ROOT: /Users/runner/work/pyenv/pyenv
run: |
echo $PYENV_ROOT
- run: |
export PYENV_ROOT="$GITHUB_WORKSPACE"
echo "PYENV_ROOT=$PYENV_ROOT" >> $GITHUB_ENV
echo "$PYENV_ROOT/shims:$PYENV_ROOT/bin" >> $GITHUB_PATH
bin/pyenv install ${{ matrix.python-version }}
bin/pyenv global ${{ matrix.python-version }}
bin/pyenv rehash
- run: python --version
- run: python -m pip --version
- run: |
pyenv install ${{ matrix.python-version }}
pyenv global ${{ matrix.python-version }}
- run: |
python --version
python -m pip --version
- shell: python # Prove that actual Python == expected Python
env:
EXPECTED_PYTHON: ${{ matrix.python-version }}
run: import os, sys ; assert sys.version.startswith(os.getenv("EXPECTED_PYTHON"))
run: |
import os, sys, os.path
correct_dir = os.path.join(
os.environ['PYENV_ROOT'],
'versions',
os.environ['EXPECTED_PYTHON'],
'bin')
assert os.path.dirname(sys.executable) == correct_dir
# bundled executables in some Anaconda releases cause the post-run step to hang in MacOS
- run: |
pyenv global system
rm -f "$(pyenv root)"/shims/*
ubuntu_build:
needs: discover_modified_scripts
@ -66,19 +75,23 @@ jobs:
libssl-dev zlib1g-dev libbz2-dev libreadline-dev libsqlite3-dev \
wget curl llvm libncurses5-dev libncursesw5-dev \
xz-utils tk-dev libffi-dev liblzma-dev python-openssl git
# https://github.com/pyenv/pyenv#installation
- run: pwd
- env:
PYENV_ROOT: /home/runner/work/pyenv/pyenv
run: |
echo $PYENV_ROOT
- run: |
export PYENV_ROOT="$GITHUB_WORKSPACE"
echo "PYENV_ROOT=$PYENV_ROOT" >> $GITHUB_ENV
echo "$PYENV_ROOT/shims:$PYENV_ROOT/bin" >> $GITHUB_PATH
bin/pyenv install ${{ matrix.python-version }}
bin/pyenv global ${{ matrix.python-version }}
bin/pyenv rehash
- run: |
pyenv install ${{ matrix.python-version }}
pyenv global ${{ matrix.python-version }}
- run: python --version
- run: python -m pip --version
- shell: python # Prove that actual Python == expected Python
env:
EXPECTED_PYTHON: ${{ matrix.python-version }}
run: import os, sys ; assert sys.version.startswith(os.getenv("EXPECTED_PYTHON"))
run: |
import os, sys, os.path
correct_dir = os.path.join(
os.environ['PYENV_ROOT'],
'versions',
os.environ['EXPECTED_PYTHON'],
'bin')
assert os.path.dirname(sys.executable) == correct_dir

158
plugins/python-build/scripts/add_miniconda.py
View file

@ -19,6 +19,7 @@ from functools import total_ordering
from pathlib import Path
from typing import NamedTuple, List, Optional, DefaultDict, Dict
import logging
import string
import requests_html
@ -26,7 +27,7 @@ logger = logging.getLogger(__name__)
CONDA_REPO = "https://repo.anaconda.com"
MINICONDA_REPO = CONDA_REPO + "/miniconda"
# ANACONDA_REPO = CONDA_REPO + "/archive"
ANACONDA_REPO = CONDA_REPO + "/archive"
install_script_fmt = """
case "$(anaconda_architecture 2>/dev/null || true)" in
@ -34,7 +35,7 @@ case "$(anaconda_architecture 2>/dev/null || true)" in
* )
{{ echo
colorize 1 "ERROR"
echo ": The binary distribution of Miniconda is not available for $(anaconda_architecture 2>/dev/null || true)."
echo ": The binary distribution of {tflavor} is not available for $(anaconda_architecture 2>/dev/null || true)."
echo
}} >&2
exit 1
@ -44,7 +45,7 @@ esac
install_line_fmt = """
"{os}-{arch}" )
install_script "Miniconda{suffix}-{version_py_version}{version_str}-{os}-{arch}" "{repo}/Miniconda{suffix}-{version_py_version}{version_str}-{os}-{arch}.sh#{md5}" "miniconda" verify_{py_version}
install_script "{tflavor}{suffix}-{version_py_version}{version_str}-{os}-{arch}" "{repo}/{tflavor}{suffix}-{version_py_version}{version_str}-{os}-{arch}.sh#{md5}" "{flavor}" verify_{py_version}
;;
""".strip()
@ -85,9 +86,20 @@ class SupportedArch(StrEnum):
X86 = "x86"
class Flavor(StrEnum):
ANACONDA = "anaconda"
MINICONDA = "miniconda"
class TFlavor(StrEnum):
ANACONDA = "Anaconda"
MINICONDA = "Miniconda"
class Suffix(StrEnum):
TWO = "2"
THREE = "3"
NONE = ""
class PyVersion(StrEnum):
@ -126,7 +138,8 @@ class VersionStr(str):
return hash(str(self))
class MinicondaVersion(NamedTuple):
class CondaVersion(NamedTuple):
flavor: Flavor
suffix: Suffix
version_str: VersionStr
py_version: Optional[PyVersion]
@ -134,7 +147,7 @@ class MinicondaVersion(NamedTuple):
@classmethod
def from_str(cls, s):
"""
Convert a string of the form "miniconda_n-ver" or "miniconda_n-py_ver-ver" to a :class:`MinicondaVersion` object.
Convert a string of the form "miniconda_n-ver" or "miniconda_n-py_ver-ver" to a :class:`CondaVersion` object.
"""
components = s.split("-")
if len(components) == 3:
@ -143,13 +156,20 @@ class MinicondaVersion(NamedTuple):
else:
miniconda_n, ver = components
py_ver = None
return MinicondaVersion(Suffix(miniconda_n[-1]), VersionStr(ver), py_ver)
suffix = miniconda_n[-1]
if suffix in string.digits:
flavor = miniconda_n[:-1]
else:
flavor = miniconda_n
suffix = ""
return CondaVersion(Flavor(flavor), Suffix(suffix), VersionStr(ver), py_ver)
def to_filename(self):
if self.py_version:
return f"miniconda{self.suffix}-{self.py_version.version()}-{self.version_str}"
return f"{self.flavor}{self.suffix}-{self.py_version.version()}-{self.version_str}"
else:
return f"miniconda{self.suffix}-{self.version_str}"
return f"{self.flavor}{self.suffix}-{self.version_str}"
def default_py_version(self):
"""
@ -159,38 +179,61 @@ class MinicondaVersion(NamedTuple):
return self.py_version
elif self.suffix == Suffix.TWO:
return PyVersion.PY27
elif self.version_str.info() < (4, 7):
v = self.version_str.info()
if self.flavor == "miniconda":
# https://docs.conda.io/projects/conda/en/latest/user-guide/tasks/manage-python.html
if v < (4, 7):
return PyVersion.PY36
else:
return PyVersion.PY37
if self.flavor == "anaconda":
# https://docs.anaconda.com/anaconda/reference/release-notes/
if v >= (2021,11):
return PyVersion.PY39
if v >= (2020,7):
return PyVersion.PY38
if v >= (2020,2):
return PyVersion.PY37
if v >= (5,3,0):
return PyVersion.PY37
return PyVersion.PY36
else:
return PyVersion.PY37
def with_version_triple(self):
return MinicondaVersion(
self.suffix, VersionStr.from_info(self.version_str.info()[:3]), self.py_version
)
raise ValueError(flavor)
class MinicondaSpec(NamedTuple):
version: MinicondaVersion
class CondaSpec(NamedTuple):
tflavor: TFlavor
version: CondaVersion
os: SupportedOS
arch: SupportedArch
md5: str
repo: str
py_version: Optional[PyVersion] = None
@classmethod
def from_filestem(cls, stem, md5, py_version=None):
def from_filestem(cls, stem, md5, repo, py_version=None):
miniconda_n, ver, os, arch = stem.split("-")
suffix = miniconda_n[-1]
if suffix in string.digits:
tflavor = miniconda_n[:-1]
else:
tflavor = miniconda_n
suffix = ""
flavor = tflavor.lower()
if ver.startswith("py"):
py_ver, ver = ver.split("_", maxsplit=1)
py_ver = PyVersion(py_ver)
else:
py_ver = None
spec = MinicondaSpec(
MinicondaVersion(Suffix(miniconda_n[-1]), VersionStr(ver), py_ver),
spec = CondaSpec(
TFlavor(tflavor),
CondaVersion(Flavor(flavor), Suffix(suffix), VersionStr(ver), py_ver),
SupportedOS(os),
SupportedArch(arch),
md5,
repo,
)
if py_version is None:
spec = spec.with_py_version(spec.version.default_py_version())
@ -201,7 +244,9 @@ class MinicondaSpec(NamedTuple):
Installation command for this version of Miniconda for use in a Pyenv installation script
"""
return install_line_fmt.format(
repo=MINICONDA_REPO,
tflavor=self.tflavor,
flavor=self.version.flavor,
repo=self.repo,
suffix=self.version.suffix,
version_str=self.version.version_str,
version_py_version=f"{self.version.py_version}_" if self.version.py_version else "",
@ -212,48 +257,47 @@ class MinicondaSpec(NamedTuple):
)
def with_py_version(self, py_version: PyVersion):
return MinicondaSpec(*self[:-1], py_version=py_version)
def with_version_triple(self):
version, *others = self
return MinicondaSpec(version.with_version_triple(), *others)
return CondaSpec(*self[:-1], py_version=py_version)
def make_script(specs: List[MinicondaSpec]):
def make_script(specs: List[CondaSpec]):
install_lines = [s.to_install_lines() for s in specs]
return install_script_fmt.format(install_lines="\n".join(install_lines))
return install_script_fmt.format(
install_lines="\n".join(install_lines),
tflavor=specs[0].tflavor,
)
def get_existing_minicondas():
def get_existing_condas(name):
"""
Enumerate existing Miniconda installation scripts in share/python-build/ except rolling releases.
:returns: A generator of :class:`MinicondaVersion` objects.
:returns: A generator of :class:`CondaVersion` objects.
"""
logger.info("Getting known miniconda versions")
logger.info("Getting known %(name)s versions",locals())
for p in out_dir.iterdir():
name = p.name
if not p.is_file() or not name.startswith("miniconda"):
entry_name = p.name
if not p.is_file() or not entry_name.startswith(name):
continue
try:
v = MinicondaVersion.from_str(name)
v = CondaVersion.from_str(entry_name)
if v.version_str != "latest":
logger.debug("Found existing miniconda version %s", v)
logger.debug("Found existing %(name)s version %(v)s", locals())
yield v
except ValueError:
pass
def get_available_minicondas():
def get_available_condas(name, repo):
"""
Fetch remote miniconda versions.
:returns: A generator of :class:`MinicondaSpec` objects for each release available for download
:returns: A generator of :class:`CondaSpec` objects for each release available for download
except rolling releases.
"""
logger.info("Fetching remote miniconda versions")
logger.info("Fetching remote %(name)s versions",locals())
session = requests_html.HTMLSession()
response = session.get(MINICONDA_REPO)
response = session.get(repo)
page: requests_html.HTML = response.html
table = page.find("table", first=True)
rows = table.find("tr")[1:]
@ -267,16 +311,17 @@ def get_available_minicondas():
stem = fname[:-3]
try:
s = MinicondaSpec.from_filestem(stem, md5)
s = CondaSpec.from_filestem(stem, md5, repo)
if s.version.version_str != "latest":
logger.debug("Found remote miniconda version %s", s)
logger.debug("Found remote %(name)s version %(s)s", locals())
yield s
except ValueError:
pass
def key_fn(spec: MinicondaSpec):
def key_fn(spec: CondaSpec):
return (
spec.tflavor,
spec.version.version_str.info(),
spec.version.suffix.value,
spec.os.value,
@ -305,29 +350,42 @@ if __name__ == "__main__":
if parsed.verbose < 3:
logging.getLogger("requests").setLevel(logging.WARNING)
existing_versions = set(get_existing_minicondas())
available_specs = set(get_available_minicondas())
existing_versions = set()
available_specs = set()
for name,repo in ("miniconda",MINICONDA_REPO),("anaconda",ANACONDA_REPO):
existing_versions |= set(get_existing_condas(name))
available_specs |= set(get_available_condas(name, repo))
# version triple to triple-ified spec to raw spec
to_add: DefaultDict[
MinicondaVersion, Dict[MinicondaSpec, MinicondaSpec]
CondaVersion, Dict[CondaSpec, CondaSpec]
] = defaultdict(dict)
logger.info("Checking for new versions")
for s in sorted(available_specs, key=key_fn):
key = s.version.with_version_triple()
if key in existing_versions or key.version_str.info() <= (4, 3, 30):
logger.debug("Ignoring version %s (too old or already exists)", s)
key = s.version
vv = key.version_str.info()
reason = None
if key in existing_versions:
reason = "already exists"
elif key.version_str.info() <= (4, 3, 30):
reason = "too old"
elif len(key.version_str.info()) >= 4:
reason = "ignoring hotfix releases"
if reason:
logger.debug("Ignoring version %(s)s (%(reason)s)", locals())
continue
to_add[key][s.with_version_triple()] = s
to_add[key][s] = s
logger.info("Writing %s scripts", len(to_add))
for ver, d in to_add.items():
specs = list(d.values())
fpath = out_dir / ver.to_filename()
script_str = make_script(specs)
logger.debug("Writing script for %s", ver)
logger.info("Writing script for %s", ver)
if parsed.dry_run:
print(f"Would write spec to {fpath}:\n" + textwrap.indent(script_str, " "))
else:

19
plugins/python-build/share/python-build/anaconda2-2019.10 Normal file
View file

@ -0,0 +1,19 @@
case "$(anaconda_architecture 2>/dev/null || true)" in
"Linux-ppc64le" )
install_script "Anaconda2-2019.10-Linux-ppc64le" "https://repo.anaconda.com/archive/Anaconda2-2019.10-Linux-ppc64le.sh#6b9809bf5d36782bfa1e35b791d983a0" "anaconda" verify_py27
;;
"Linux-x86_64" )
install_script "Anaconda2-2019.10-Linux-x86_64" "https://repo.anaconda.com/archive/Anaconda2-2019.10-Linux-x86_64.sh#69c64167b8cf3a8fc6b50d12d8476337" "anaconda" verify_py27
;;
"MacOSX-x86_64" )
install_script "Anaconda2-2019.10-MacOSX-x86_64" "https://repo.anaconda.com/archive/Anaconda2-2019.10-MacOSX-x86_64.sh#311aeb49cbe6d296f499efcd01a73f5e" "anaconda" verify_py27
;;
* )
{ echo
colorize 1 "ERROR"
echo ": The binary distribution of Anaconda is not available for $(anaconda_architecture 2>/dev/null || true)."
echo
} >&2
exit 1
;;
esac

25
plugins/python-build/share/python-build/anaconda3-2021.04 Normal file
View file

@ -0,0 +1,25 @@
case "$(anaconda_architecture 2>/dev/null || true)" in
"Linux-aarch64" )
install_script "Anaconda3-2021.04-Linux-aarch64" "https://repo.anaconda.com/archive/Anaconda3-2021.04-Linux-aarch64.sh#14f48f5d1310478b11940a3b96eec7b6" "anaconda" verify_py38
;;
"Linux-ppc64le" )
install_script "Anaconda3-2021.04-Linux-ppc64le" "https://repo.anaconda.com/archive/Anaconda3-2021.04-Linux-ppc64le.sh#e5c8220526b95293e669734f91194acc" "anaconda" verify_py38
;;
"Linux-s390x" )
install_script "Anaconda3-2021.04-Linux-s390x" "https://repo.anaconda.com/archive/Anaconda3-2021.04-Linux-s390x.sh#e61fac26bf61bc5c3e3c1a93abc4d8e2" "anaconda" verify_py38
;;
"Linux-x86_64" )
install_script "Anaconda3-2021.04-Linux-x86_64" "https://repo.anaconda.com/archive/Anaconda3-2021.04-Linux-x86_64.sh#230f2c3c343ee58073bf41bd896dd76c" "anaconda" verify_py38
;;
"MacOSX-x86_64" )
install_script "Anaconda3-2021.04-MacOSX-x86_64" "https://repo.anaconda.com/archive/Anaconda3-2021.04-MacOSX-x86_64.sh#3caed29ad5564b3567676504669342dc" "anaconda" verify_py38
;;
* )
{ echo
colorize 1 "ERROR"
echo ": The binary distribution of Anaconda is not available for $(anaconda_architecture 2>/dev/null || true)."
echo
} >&2
exit 1
;;
esac

28
plugins/python-build/share/python-build/anaconda3-2022.05 Normal file
View file

@ -0,0 +1,28 @@
case "$(anaconda_architecture 2>/dev/null || true)" in
"Linux-aarch64" )
install_script "Anaconda3-2022.05-Linux-aarch64" "https://repo.anaconda.com/archive/Anaconda3-2022.05-Linux-aarch64.sh#7e822f5622fa306c0aa42430ba884454" "anaconda" verify_py39
;;
"Linux-ppc64le" )
install_script "Anaconda3-2022.05-Linux-ppc64le" "https://repo.anaconda.com/archive/Anaconda3-2022.05-Linux-ppc64le.sh#166b576c7e9d438b0a80840f94b44827" "anaconda" verify_py39
;;
"Linux-s390x" )
install_script "Anaconda3-2022.05-Linux-s390x" "https://repo.anaconda.com/archive/Anaconda3-2022.05-Linux-s390x.sh#00ba3bf29ac51db5e0954b6f217fa468" "anaconda" verify_py39
;;
"Linux-x86_64" )
install_script "Anaconda3-2022.05-Linux-x86_64" "https://repo.anaconda.com/archive/Anaconda3-2022.05-Linux-x86_64.sh#a01150aff48fcb6fcd6472381652de04" "anaconda" verify_py39
;;
"MacOSX-arm64" )
install_script "Anaconda3-2022.05-MacOSX-arm64" "https://repo.anaconda.com/archive/Anaconda3-2022.05-MacOSX-arm64.sh#c35c8bdbeeda5e5ffa5b79d1f5ee8082" "anaconda" verify_py39
;;
"MacOSX-x86_64" )
install_script "Anaconda3-2022.05-MacOSX-x86_64" "https://repo.anaconda.com/archive/Anaconda3-2022.05-MacOSX-x86_64.sh#5319de6536212892dd2da8b70d602ee1" "anaconda" verify_py39
;;
* )
{ echo
colorize 1 "ERROR"
echo ": The binary distribution of Anaconda is not available for $(anaconda_architecture 2>/dev/null || true)."
echo
} >&2
exit 1
;;
esac